Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs36107206 | chr1:63805650 | T/C | 2.83E-6 | 211 | 14.83 | 18 | 8.03 | KM Plot |
KIRP | rs36116761 | chr6:27818482 | C/G | 1.98E-7 | 214 | 16.47 | 12.8 | 9.77 | KM Plot |
KIRP | rs36117979 | chr10:70671244 | C/T | 7.43E-9 | 214 | 14.87 | 18.77 | 9.77 | KM Plot |
KIRP | rs36231460 | chr5:79952861 | T/TAGAATTTTCTATTA | 0.000105 | 212 | 18.65 | 14.85 | 10.3 | KM Plot |
KIRP | rs367600103 | chr15:40718165 | A/T | 0.000132 | 205 | 14.47 | 20 | 9.25 | KM Plot |
KIRP | rs368004823 | chr6:110797426 | T/G | 7.96E-8 | 208 | 6.7 | 13.17 | 18.47 | KM Plot |
KIRP | rs368833754 | chr5:79924226 | C/T | 0.000114 | 212 | 18.65 | 14.83 | 9.77 | KM Plot |
KIRP | rs370698197 | chr1:89465283 | GTTCC/GTTCCTTCC | 2.59E-5 | 203 | 16.68 | 16.75 | 10.23 | KM Plot |
KIRP | rs372088860 | chr5:79924074 | G/C | 0.000114 | 212 | 18.65 | 14.83 | 9.77 | KM Plot |
KIRP | rs372248876 | chr14:59997430 | AT/A | 0.000251 | 212 | 16.43 | 16.53 | 11.2 | KM Plot |
KIRP | rs372760398 | chr5:79924327 | G/A | 0.000114 | 212 | 18.65 | 14.83 | 9.77 | KM Plot |
KIRP | rs372951209 | chr1:48806181 | TA/TAA | 3.52E-7 | 212 | 14.87 | 19.87 | 11.03 | KM Plot |
KIRP | rs373025786 | chr1:89566308 | GAGC/G | 5.82E-6 | 206 | 9.77 | 19.83 | 15.65 | KM Plot |
KIRP | rs3733875 | chr5:176637240 | G/T | 5.72E-7 | 210 | 15.2 | 20.53 | 9.77 | KM Plot |
KIRP | rs3736109 | chr19:42558629 | G/A | 0.000314 | 214 | 15.1 | 17 | 11.2 | KM Plot |